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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926652.1_cds_XP_016474620.1_66629
CDS Infomation

[gene=LOC107796381] [db_xref=GeneID:107796381] [protein=arginine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2] [protein_id=XP_016474620.1] [location=join(139078..139086,139196..139335,139804..139879,140041..140142,140240..140455,142390..142470,142864..142947,143236..143340,145808..145986,146655..146739,146886..147072,147244..147313,149326..149395,149664..149753,149974..150042,150135..150233,150818..150928)] [gbkey=CDS]
Sequence

ATGGCAACTGATAAAGAAATTGTAGGGAGTGTTAAGGAGCAATTAGCAAAGCTATTTGAG
GAATCACTTAGGGCAGCATTCCCTGATATTGAAGATGTGCATCCTATGATTGCTATTTGC
AATGATTCAAGACACGGTGACTACCAGTGCAACAATGCGATGAGCTTGTGGAATAAGATT
AAAGGCCAAGGTACCCAGTTCAGGGGTCCTCAACCTGTTGGAAAGGCTATTATAGATAAT
CTACCTGCATCAGAAATGATTGAGAGATGCTCTACAGCAGGACCTGGTTTTATTAATGTT
GTATTAAAAAAGCAATGGATTGCAAAGAGCATTGAGAGGATGCTAATAGACGGTATTGAA
ACATGGGCACCAAAGCTTCCTGTCAAAAGGACAGTTGTTGATTTTTCATCTCCAAACATA
GCAAAGGAGATGCATGTTGGTCATTTGAGATCTACTATTATTGGAGACACTTTGGCCCGA
ATGCTGGAGTTTTCTAATGTTGAAGTTCTTAGGAGAAACCATGTGGGTGACTGGGGAACA
CAGTTTGGAATGTTAATTGAGTACCTCTTTGACAAAATTCCTAACTGGGAAGCTGCTAGT
GCCCAAGCCATTGGAGATTTGCAGGCGTTCTATAAGGCCTCAAAACAAAGATTTGACAAT
GATCCAGATTTCAAGGAGAGGGCGCAAAAGGCTGTTGTTAGTCTACAGGGAGGGGAGGAG
AAGTACAGGAAGGCATGGACACAAATTTGTGAAGTTAGCAGAGAAGAATTTCAAAGGGTT
TACCAAAGACTTGGAGTTCACTTAGAGGAAAAGGGTGAAAGCTTTTACAATCCGTACATT
CCCAAGGCGTTAGATTTGCTTAACAACAAGGGATTGATTCAAGAAAGCGAAGGAGCTCGT
GTTATCTTTATTGAAGGGAAAAAAATACCTCTTATCGTTGTTAAGAGGGATGGTGGTTTC
AACTATGCTTCAACTGATCTTACTGCACTATGGTATCGGCTTAATGAAGAGAAAGCAGAC
TGGATGATATATGTGACTGATGTTGGCCAGCGAGAGCACTTTGAAATGGTCTTTGCTGCT
GCAAAACTTGCAGGCTGGCTTCCCCAAAACGAGAATGACTTTCCCAAGGCCAGTCATGTA
GGATTTGGTCTAGTTTTAGGAGATGATGGCAAACGATTTCGTACTCGGAGTACTGAGGTG
GTTAAGCTAGTTGATTTACTTGATGAGGCAAAGAGCCGGTGTAAATTAGCACTTGAAGAA
CGAGGTAAGGCAACAGAATGGACAGCTGAGGAACTGGAGCAAACTGCCGAAGCAGTTGGA
TATGGTGCTGTGAAATATGCAGACTTGAAGAACAACAGATTGACCAACTACACATTTAAT
TTCGATCAGATGCTTAGTGATAAGGGAAATACGGCTGTGTATTTGCTGTATGCACATGCC
CGAATTTGTTCGATCATCAGAAAGTCTGGTAGAGATATAGAGGAGTTAAAGAAGGTAGGA
GGTATAGTATTGGCTCATCCAGATGAACGTGCTTTAGGCCTTCATTTGCTCCAGTTCGCT
GAGATCGTTGAGGAGGCTTGCATCAATCTTTTGCCAAACCTTTTGTGTGAATATCTTTAC
AAATTGTCTGAAGACTTCACAAAATTTTACACCAATTGTCAGGTGGTTGGTTCAGCGGAG
GAAACACGCAGGCTTCTGCTGTGTGAGGCAACAGCTGTTGTGATGAGAAAGTGTTTTTAT
CTGTTGGGTATCACCCCTGTTTATAAAATTTGA

Peptide Sequence

PEP ID

XP_016474620.1
PEP Infomation

PREDICTED: arginine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MATDKEIVGSVKEQLAKLFEESLRAAFPDIEDVHPMIAICNDSRHGDYQCNNAMSLWNKI
KGQGTQFRGPQPVGKAIIDNLPASEMIERCSTAGPGFINVVLKKQWIAKSIERMLIDGIE
TWAPKLPVKRTVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVEVLRRNHVGDWGT
QFGMLIEYLFDKIPNWEAASAQAIGDLQAFYKASKQRFDNDPDFKERAQKAVVSLQGGEE
KYRKAWTQICEVSREEFQRVYQRLGVHLEEKGESFYNPYIPKALDLLNNKGLIQESEGAR
VIFIEGKKIPLIVVKRDGGFNYASTDLTALWYRLNEEKADWMIYVTDVGQREHFEMVFAA
AKLAGWLPQNENDFPKASHVGFGLVLGDDGKRFRTRSTEVVKLVDLLDEAKSRCKLALEE
RGKATEWTAEELEQTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLSDKGNTAVYLLYAHA
RICSIIRKSGRDIEELKKVGGIVLAHPDERALGLHLLQFAEIVEEACINLLPNLLCEYLY
KLSEDFTKFYTNCQVVGSAEETRRLLLCEATAVVMRKCFYLLGITPVYKI

Transcript Sequence

Gene sequence data has not been registered.